Information for Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer (Motif 99)


Reverse Opposite:

p-value:5.073e-164
log p-value:-3.760e+02
Information Content per bp:1.655
Total Number of Sequences:50000.0
Total Number of Target Sequences:10171.0
Total Instances of Motif:989.7
Total Instances of Motif in Targets:528.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGTTAAACATTAA
GGTTAAACATTAA

MA0153.1_HNF1B/Jaspar

Match Rank:2
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:GGTTAAACATTAA
-GTTAAATATTAA

MA0046.1_HNF1A/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GGTTAAACATTAA-
GGTTAATAATTAAC

HAHB4(HD-ZIP)/Helianthus anuus/AthaMap

Match Rank:4
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGTTAAACATTAA
---CAATCATTA-

Dfd/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GGTTAAACATTAA
-----ATAATTAA

Dfd/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GGTTAAACATTAA
-----ATAATTAA

br-Z4/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGTTAAACATTAA
---TAATTATT--

MA0166.1_Antp/Jaspar

Match Rank:8
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GGTTAAACATTAA
------TCATTAA

PHO2(MacIsaac)/Yeast

Match Rank:9
Score:0.66
Offset:8
Orientation:forward strand
Alignment:GGTTAAACATTAA-
--------ATTAAG

eve/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTTAAACATTAA--
---AAANNATTAACG