Information for HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer (Motif 97)


Reverse Opposite:

p-value:1.675e-277
log p-value:-6.373e+02
Information Content per bp:1.697
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TACGTGCV
TACGTGCV

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---TACGTGCV
GGGTACGTGC-

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:3
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-TACGTGCV
GGACGTGC-

MA0569.1_MYC4/Jaspar

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-TACGTGCV
ACACGTGC-

MA0004.1_Arnt/Jaspar

Match Rank:5
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TACGTGCV
CACGTG--

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-TACGTGCV-
KCACGTGMCN

MA0281.1_CBF1/Jaspar

Match Rank:7
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-TACGTGCV
GCACGTGA-

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:8
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TACGTGCV
CACGTGA-

TGA1a(bZIP)/Nicotiana tabacum/AthaMap

Match Rank:9
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TACGTGCV
CTCACGTGNG

MA0310.1_HAC1/Jaspar

Match Rank:10
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TACGTGCV
CACGTGTC