Information for GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer (Motif 93)


Reverse Opposite:

p-value:0.000e+00
log p-value:-5.701e+03
Information Content per bp:1.635
Total Number of Sequences:49999.0
Total Number of Target Sequences:2919.0
Total Instances of Motif:1870.5
Total Instances of Motif in Targets:1738.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NAGNACANNNTGTNCT
NAGNACANNNTGTNCT

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:NAGNACANNNTGTNCT
NAGAACAGNCTGTNCT

GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NAGNACANNNTGTNCT
VAGRACAKWCTGTYC-

MA0113.2_NR3C1/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NAGNACANNNTGTNCT
-AGNACATTNTGTTCT

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NAGNACANNNTGTNCT
VAGRACAKNCTGTBC-

MA0007.2_AR/Jaspar

Match Rank:6
Score:0.91
Offset:0
Orientation:forward strand
Alignment:NAGNACANNNTGTNCT
AAGAACAGAATGTTC-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.65
Offset:9
Orientation:reverse strand
Alignment:NAGNACANNNTGTNCT---
---------CTGTTCCTGG

MA0258.2_ESR2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:NAGNACANNNTGTNCT
-AGGTCACCCTGACCT

HAC1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:NAGNACANNNTGTNCT
---GACACGCTGGCA-

MA0261.1_lin-14/Jaspar

Match Rank:10
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:NAGNACANNNTGTNCT
---------GTGTTC-