Information for GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer (Motif 92)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.507e+03
Information Content per bp:1.778
Total Number of Sequences:50000.0
Total Number of Target Sequences:5214.0
Total Instances of Motif:1326.9
Total Instances of Motif in Targets:874.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CGTGGGTGGTCC
CGTGGGTGGTCC

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGTGGGTGGTCC----
NNANTGGTGGTCTTNNN

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CGTGGGTGGTCC---
NTNTGGGGGGTCNNNA

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGTGGGTGGTCC
NGCGTGGGCGGR--

PCF5(TCP)/Oryza sativa/AthaMap

Match Rank:5
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CGTGGGTGGTCC---
-----GTGGTCCCGC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGTGGGTGGTCC
TGCGTGGGYG----

MA0472.1_EGR2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGTGGGTGGTCC
GTGCGTGGGCGGGNG

MA0587.1_TCP16/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CGTGGGTGGTCC---
-----GTGGACCCGG

MA0456.1_opa/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTGGGTGGTCC
CAGCGGGGGGTC-

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGTGGGTGGTCC
---GGGTGC---