Information for GFX(?)/Promoter/Homer (Motif 89)


Reverse Opposite:

p-value:4.678e-210
log p-value:-4.820e+02
Information Content per bp:1.789
Total Number of Sequences:149303.9
Total Number of Target Sequences:11385.0
Total Instances of Motif:996.9
Total Instances of Motif in Targets:400.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ATTCTCGCGAGA
ATTCTCGCGAGA

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:ATTCTCGCGAGA---
GTTCTCGCGAGANCC

MA0527.1_ZBTB33/Jaspar

Match Rank:3
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--ATTCTCGCGAGA-
NAGNTCTCGCGAGAN

STB1(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATTCTCGCGAGA
-TTTTCGCG---

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATTCTCGCGAGA
--TTTCGCGT--

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATTCTCGCGAGA-
-TTTTCGCGCGAA

SWI4(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATTCTCGCGAGA
-TTTTCGCGT--

MA0401.1_SWI4/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATTCTCGCGAGA
--TTTCGCGT--

MA0374.1_RSC3/Jaspar

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:ATTCTCGCGAGA
-----CGCGCGG

srp/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATTCTCGCGAGA-
-CTATCGGTAGAT