Information for FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer (Motif 71)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.687e+04
Information Content per bp:1.785
Total Number of Sequences:183170.2
Total Number of Target Sequences:22729.0
Total Instances of Motif:52010.5
Total Instances of Motif in Targets:26378.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AAAGTAAACA
AAAGTAAACA

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AAAGTAAACA
AAAGTAAACA

MA0148.3_FOXA1/Jaspar

Match Rank:3
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTAAACA----
CAAAGTAAACANNNN

MA0546.1_PHA-4/Jaspar

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:AAAGTAAACA
AAAGTAAACA

MA0047.2_Foxa2/Jaspar

Match Rank:5
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTAAACA
NCTAAGTAAACA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:AAAGTAAACA--
TATGTAAACANG

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--AAAGTAAACA-----
AAAAAGTAAACAAAGAC

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.93
Offset:1
Orientation:forward strand
Alignment:AAAGTAAACA--
-AAGTAAACAAA

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:AAAGTAAACA
-AAATAAACA

FKH2/FKH2_YPD/18-FKH1,18-FKH2(Harbison)/Yeast

Match Rank:10
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AAAGTAAACA-
AAANGTAAACAA