Information for AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer (Motif 7)


Reverse Opposite:

p-value:0.000e+00
log p-value:-2.925e+03
Information Content per bp:1.668
Total Number of Sequences:85575.8
Total Number of Target Sequences:13548.0
Total Instances of Motif:47304.5
Total Instances of Motif in Targets:15468.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CCAGGAACAG
CCAGGAACAG

MA0261.1_lin-14/Jaspar

Match Rank:2
Score:0.79
Offset:4
Orientation:forward strand
Alignment:CCAGGAACAG
----GAACAC

MA0261.1_lin-14/Jaspar

Match Rank:3
Score:0.79
Offset:4
Orientation:forward strand
Alignment:CCAGGAACAG
----GAACAC

MA0007.2_AR/Jaspar

Match Rank:4
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CCAGGAACAG-------
--AAGAACAGAATGTTC

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCAGGAACAG------
CGAAGCACACAAAATA

PHD1(MacIsaac)/Yeast

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CCAGGAACAG
--AGGCAC--

Caup/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCAGGAACAG-
-CAATAACAAA

MA0210.1_ara/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CCAGGAACAG
----TAACA-

MA0319.1_HSF1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCAGGAACAG
-ATGGAACA-

MA0217.1_caup/Jaspar

Match Rank:10
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CCAGGAACAG
----TAACA-