Information for ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer (Motif 6)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.055e+04
Information Content per bp:1.608
Total Number of Sequences:50001.0
Total Number of Target Sequences:9390.0
Total Instances of Motif:9296.7
Total Instances of Motif in Targets:7639.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AGNACAGNCTGTTCTN
AGNACAGNCTGTTCTN

GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:AGNACAGNCTGTTCTN
AGNACANNNTGTNCTN

GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:AGNACAGNCTGTTCTN
-GRACAGWMTGTYCTB

MA0113.2_NR3C1/Jaspar

Match Rank:4
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AGNACAGNCTGTTCTN
AGAACAGAATGTTCT-

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:AGNACAGNCTGTTCTN
-GVACAGNMTGTYCTB

MA0007.2_AR/Jaspar

Match Rank:6
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:AGNACAGNCTGTTCTN
-GNACANNNTGTTCTT

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.66
Offset:8
Orientation:reverse strand
Alignment:AGNACAGNCTGTTCTN--
--------CTGTTCCTGG

MA0258.2_ESR2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGNACAGNCTGTTCTN
AGGNCANNGTGACCT-

ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGNACAGNCTGTTCTN
-GGTCANNGTGACCTN

MA0112.2_ESR1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGNACAGNCTGTTCTN----
AGGTCAGGGTGACCTGGNNN