Information for ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer (Motif 57)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.552e+04
Information Content per bp:1.638
Total Number of Sequences:29999.0
Total Number of Target Sequences:13064.0
Total Instances of Motif:9699.8
Total Instances of Motif in Targets:9266.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NAGGTCACNNTGACC
NAGGTCACNNTGACC

MA0258.2_ESR2/Jaspar

Match Rank:2
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NAGGTCACNNTGACC-
-AGGTCACCCTGACCT

MA0112.2_ESR1/Jaspar

Match Rank:3
Score:0.93
Offset:-4
Orientation:forward strand
Alignment:----NAGGTCACNNTGACC-
GGCCCAGGTCACCCTGACCT

MA0066.1_PPARG/Jaspar

Match Rank:4
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-NAGGTCACNNTGACC----
GTAGGTCACGGTGACCTACT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NAGGTCACNNTGACC
-AGGTCA--------

MA0160.1_NR4A2/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:NAGGTCACNNTGACC
AAGGTCAC-------

MA0071.1_RORA_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---NAGGTCACNNTGACC
ATCAAGGTCA--------

Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-NAGGTCACNNTGACC
GTAGGTCACTGGGTCA

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--NAGGTCACNNTGACC
TCAAGGTCAN-------

RTG3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:NAGGTCACNNTGACC
--GGTCAC-------