Information for FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer (Motif 5)


Reverse Opposite:

p-value:0.000e+00
log p-value:-8.019e+02
Information Content per bp:1.634
Total Number of Sequences:50000.0
Total Number of Target Sequences:1426.0
Total Instances of Motif:863.3
Total Instances of Motif in Targets:387.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AGTAAACAAAAAAGAACANN
AGTAAACAAAAAAGAACANN

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGTAAACAAAAAAGAACANN
AAAGTAAACAAAAATT------

MA0593.1_FOXP2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGTAAACAAAAAAGAACANN
AAGTAAACAAA----------

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAACAAAAAAGAACANN
AAATAAACA------------

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTAAACAAAAAAGAACANN
-GCAAACAM-----------

MA0296.1_FKH1/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AGTAAACAAAAAAGAACANN
TGAATTGTAAACAAAGAGGA-----

MA0481.1_FOXP1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGTAAACAAAAAAGAACANN
CAAAAGTAAACAAAG---------

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGTAAACAAAAAAGAACANN
AAAAAGTAAACAAAGAC-------

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAACAAAAAAGAACANN
NDGTAAACARRN---------

FKH1/FKH1_YPD/53-FKH1,53-FKH2(Harbison)/Yeast

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTAAACAAAAAAGAACANN
-GTAAACAA-----------