Information for EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer (Motif 46)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.520e+03
Information Content per bp:1.621
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
GGYAGCAYDTGCTDCCCNNN

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGYAGCAYDTGCTDCCCNNN
ADGGYAGYAGCATCT-------

MA0305.1_GCR2/Jaspar

Match Rank:3
Score:0.57
Offset:10
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
----------GCTTCCT---

GCR2(MacIsaac)/Yeast

Match Rank:4
Score:0.57
Offset:10
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
----------GCTTCCN---

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGYAGCAYDTGCTDCCCNNN
NNNTTAGGTAGCNTNT----------

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGYAGCAYDTGCTDCCCNNN
NNTGTAGGTAGCANNT----------

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGYAGCAYDTGCTDCCCNNN
-----CAGCTGTTTCCT---

MA0597.1_THAP1/Jaspar

Match Rank:8
Score:0.52
Offset:11
Orientation:forward strand
Alignment:GGYAGCAYDTGCTDCCCNNN
-----------CTGCCCGCA

Tag/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGYAGCAYDTGCTDCCCNNN
CAGGTAG---------------

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGYAGCAYDTGCTDCCCNNN
NGAAGC--------------