Information for E2F(E2F)/Hela-CellCycle-Expression/Homer (Motif 42)


Reverse Opposite:

p-value:1.997e-20
log p-value:-4.536e+01
Information Content per bp:1.718
Total Number of Sequences:20264.3
Total Number of Target Sequences:437.0
Total Instances of Motif:727.4
Total Instances of Motif in Targets:66.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TTCGCGCGAAAA
TTCGCGCGAAAA

MA0541.1_EFL-1/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--TTCGCGCGAAAA-
CGCGCGCGCGAAATT

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:TTCGCGCGAAAA-
-TGGCGGGAAAHB

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.86
Offset:2
Orientation:forward strand
Alignment:TTCGCGCGAAAA
--GGCGGGAAAH

STB1(MacIsaac)/Yeast

Match Rank:5
Score:0.84
Offset:4
Orientation:forward strand
Alignment:TTCGCGCGAAAA
----CGCGAAAA

SWI4(MacIsaac)/Yeast

Match Rank:6
Score:0.82
Offset:3
Orientation:forward strand
Alignment:TTCGCGCGAAAA
---ACGCGAAAA

MA0470.1_E2F4/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TTCGCGCGAAAA
-GGGCGGGAAGG

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:8
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TTCGCGCGAAAA
--GACGCGAAA-

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TTCGCGCGAAAA
CWGGCGGGAA--

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:10
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:TTCGCGCGAAAA
---ACGCGAAA-