Information for CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer (Motif 35)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.535e+03
Information Content per bp:1.633
Total Number of Sequences:15000.0
Total Number of Target Sequences:4550.0
Total Instances of Motif:350.4
Total Instances of Motif in Targets:347.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TGCAGTTCCNNNNNTGGCCA
TGCAGTTCCNNNNNTGGCCA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGCAGTTCCNNNNNTGGCCA
AGATGCAATCCC-----------

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGTTCCNNNNNTGGCCA
NNNANTGCAGTGCNNTT--------

MA0385.1_SOK2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGTTCCNNNNNTGGCCA
NNCCTGCAGGT-------------

MA0355.1_PHD1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGTTCCNNNNNTGGCCA
NGNTGCAGGN-------------

CST6(MacIsaac)/Yeast

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCAGTTCCNNNNNTGGCCA
TGCATTTN------------

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGTTCCNNNNNTGGCCA
GTTTCACTTCCG----------

MA0161.1_NFIC/Jaspar

Match Rank:8
Score:0.50
Offset:15
Orientation:reverse strand
Alignment:TGCAGTTCCNNNNNTGGCCA-
---------------TGCCAA

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TGCAGTTCCNNNNNTGGCCA
GGGTGCANT--------------

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TGCAGTTCCNNNNNTGGCCA
ACTACAATTCCC----------