Information for CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer (Motif 34)


Reverse Opposite:

p-value:0.000e+00
log p-value:-6.282e+03
Information Content per bp:1.636
Total Number of Sequences:15000.0
Total Number of Target Sequences:4645.0
Total Instances of Motif:2877.2
Total Instances of Motif in Targets:2765.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ANAGTGCCACCTGGTGGCCA
ANAGTGCCACCTGGTGGCCA

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:ANAGTGCCACCTGGTGGCCA
-TAGCGCCCCCTGGTGGCCA

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--ANAGTGCCACCTGGTGGCCA
CNNBRGCGCCCCCTGSTGGC--

MA0531.1_CTCF/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:ANAGTGCCACCTGGTGGCCA
--GGCGCCATCTAGCGG---

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:ANAGTGCCACCTGGTGGCCA
-----GCCATCTGTT-----

MA0461.1_Atoh1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ANAGTGCCACCTGGTGGCCA
-----GCCATCTG-------

MA0373.1_RPN4/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ANAGTGCCACCTGGTGGCCA
----CGCCACC---------

PL0002.1_hlh-2::hlh-3/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ANAGTGCCACCTGGTGGCCA
--AGTAACACCTGCTAATC-

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ANAGTGCCACCTGGTGGCCA
GGTCCCGCCCCCTTCTC----

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ANAGTGCCACCTGGTGGCCA
--GCCGCCATCTTG------