Information for CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer (Motif 33)


Reverse Opposite:

p-value:0.000e+00
log p-value:-2.388e+03
Information Content per bp:1.724
Total Number of Sequences:49999.6
Total Number of Target Sequences:3506.0
Total Instances of Motif:4648.4
Total Instances of Motif in Targets:2130.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GCTAATCC
GCTAATCC

bcd/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:GCTAATCC-
CCTAATCCC

MA0234.1_oc/Jaspar

Match Rank:3
Score:0.97
Offset:2
Orientation:forward strand
Alignment:GCTAATCC
--TAATCC

MA0212.1_bcd/Jaspar

Match Rank:4
Score:0.96
Offset:2
Orientation:forward strand
Alignment:GCTAATCC
--TAATCC

bcd-2/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GCTAATCC
-TTAATCC

bcd/dmmpmm(Down)/fly

Match Rank:6
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GCTAATCC
-TTAATCC

Gsc/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:GCTAATCC
--TAATCC

MA0190.1_Gsc/Jaspar

Match Rank:8
Score:0.96
Offset:2
Orientation:forward strand
Alignment:GCTAATCC
--TAATCC

bcd/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-GCTAATCC-
GGTTAATCCN

oc/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GCTAATCC
-TTAATCC