Information for Unknown1/Arabidopsis-Promoters/Homer (Motif 290)


Reverse Opposite:

p-value:2.297e-283
log p-value:-6.508e+02
Information Content per bp:1.637
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown1/Arabidopsis-Promoters/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:RGGGTAWWWTHGTAA
RGGGTAWWWTHGTAA

MA0363.1_REB1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-RGGGTAWWWTHGTAA
CCGGGTAAC-------

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RGGGTAWWWTHGTAA
-GGGAATTGTAGT--

REB1/SacCer-Promoters/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RGGGTAWWWTHGTAA
KCCGGGTAAYRR-----

REB1/REB1_YPD/61-REB1(Harbison)/Yeast

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RGGGTAWWWTHGTAA
CGGGTAA--------

REB1(MacIsaac)/Yeast

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RGGGTAWWWTHGTAA
CCGGGTAA--------

MA0460.1_ttk/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-RGGGTAWWWTHGTAA
AAGGATAAT-------

MA0403.1_TBF1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RGGGTAWWWTHGTAA
NTAGGGTT---------

HAP1(MacIsaac)/Yeast

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RGGGTAWWWTHGTAA
--GGNGTTATCG---

STB2(MacIsaac)/Yeast

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RGGGTAWWWTHGTAA
CGGGTAAN-------