Information for CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer (Motif 29)


Reverse Opposite:

p-value:0.000e+00
log p-value:-2.008e+03
Information Content per bp:1.750
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GHCACGTG
GHCACGTG

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GHCACGTG
GNCACGTG

MA0004.1_Arnt/Jaspar

Match Rank:3
Score:0.98
Offset:2
Orientation:forward strand
Alignment:GHCACGTG
--CACGTG

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-GHCACGTG-
NGKCACGTGM

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-GHCACGTG-
GGTCACGTGA

PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer

Match Rank:6
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GHCACGTG---
-BCACGTGVDN

Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GHCACGTG----
ACCACGTGGTNN

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:8
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GHCACGTG
-TCACGTG

PHO4/PHO4_Pi-/38-PHO4(Harbison)/Yeast

Match Rank:9
Score:0.96
Offset:2
Orientation:forward strand
Alignment:GHCACGTG-
--CACGTGG

MA0561.1_PIF4/Jaspar

Match Rank:10
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GHCACGTG
GCCACGTG