Information for Unknown3/Arabidopsis-Promoters/Homer (Motif 288)


Reverse Opposite:

p-value:1.195e-185
log p-value:-4.258e+02
Information Content per bp:1.593
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AYTAAACCGG
AYTAAACCGG

prd/dmmpmm(Down)/fly

Match Rank:2
Score:0.80
Offset:3
Orientation:forward strand
Alignment:AYTAAACCGG
---AAACTG-

OPI1(MacIsaac)/Yeast

Match Rank:3
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AYTAAACCGG
--CGAACCG-

MA0349.1_OPI1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AYTAAACCGG
--CGAACCG-

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:AYTAAACCGG--
----AACCGANA

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AYTAAACCGG--
--NHAACBGYYV

MA0218.1_ct/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AYTAAACCGG
-TTGAAC---

grh/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AYTAAACCGG
---AAACCAG

grh/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AYTAAACCGG
ANAAAACCAG

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AYTAAACCGG------
ATGGAAACCGTTATTTT