Information for SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer (Motif 286)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.052e+03
Information Content per bp:1.719
Total Number of Sequences:49999.0
Total Number of Target Sequences:9325.0
Total Instances of Motif:16689.1
Total Instances of Motif in Targets:5654.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CCAAAAAGGG
CCAAAAAGGG

MA0563.1_SEP3/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:CCAAAAAGGG-
CCAAAAATGGA

MA0556.1_AP3/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCAAAAAGGG---
TTCCAAAAATGGAAA

kni/dmmpmm(Down)/fly

Match Rank:4
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CCAAAAAGGG
-CAAAAA---

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CCAAAAAGGG
CCATATATGG

MA0555.1_SVP/Jaspar

Match Rank:6
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----CCAAAAAGGG------
ATTACCAAAAAAGGAAAGAA

MA0548.1_AGL15/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CCAAAAAGGG---
TNCCAAAAATGGAAA

MA0083.2_SRF/Jaspar

Match Rank:8
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CCAAAAAGGG---
CATGCCCAAATAAGGCAA

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CCAAAAAGGG
-AAAAAA---

MA0559.1_PI/Jaspar

Match Rank:10
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CCAAAAAGGG----
CCAAAAAAGGAAAA