Information for PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer (Motif 285)


Reverse Opposite:

p-value:0.000e+00
log p-value:-7.562e+02
Information Content per bp:1.674
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:BCACGTGVDN
BCACGTGVDN

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-BCACGTGVDN
GNCACGTG---

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-BCACGTGVDN
GHCACGTG---

Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---BCACGTGVDN
NNACCACGTGGT-

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--BCACGTGVDN
GGTCACGTGA--

MA0568.1_MYC3/Jaspar

Match Rank:6
Score:0.96
Offset:0
Orientation:forward strand
Alignment:BCACGTGVDN
GCACGTGC--

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--BCACGTGVDN
NGKCACGTGM--

MA0004.1_Arnt/Jaspar

Match Rank:8
Score:0.96
Offset:1
Orientation:forward strand
Alignment:BCACGTGVDN
-CACGTG---

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:9
Score:0.95
Offset:0
Orientation:forward strand
Alignment:BCACGTGVDN
TCACGTG---

PHO4/PHO4_Pi-/38-PHO4(Harbison)/Yeast

Match Rank:10
Score:0.95
Offset:1
Orientation:forward strand
Alignment:BCACGTGVDN
-CACGTGG--