Information for FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer (Motif 282)


Reverse Opposite:

p-value:1.497e-272
log p-value:-6.259e+02
Information Content per bp:1.581
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:HHCACGCGCBTN
HHCACGCGCBTN

MA0557.1_FHY3/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:HHCACGCGCBTN
CTCACGCGCTCA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:HHCACGCGCBTN
--CACGCA----

h/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--HHCACGCGCBTN
NNGGCACGCGCCAN

MA0329.1_MBP1/Jaspar

Match Rank:5
Score:0.82
Offset:3
Orientation:forward strand
Alignment:HHCACGCGCBTN
---ACGCGTA--

h/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.82
Offset:0
Orientation:forward strand
Alignment:HHCACGCGCBTN
GNCACGCGCCA-

MA0374.1_RSC3/Jaspar

Match Rank:7
Score:0.81
Offset:4
Orientation:forward strand
Alignment:HHCACGCGCBTN
----CGCGCGG-

SWI6(MacIsaac)/Yeast

Match Rank:8
Score:0.81
Offset:2
Orientation:forward strand
Alignment:HHCACGCGCBTN
--GACGCG----

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:9
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:HHCACGCGCBTN
---ACGCGTC--

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:10
Score:0.78
Offset:3
Orientation:forward strand
Alignment:HHCACGCGCBTN
---ACGCGTT--