Information for TOD6?/SacCer-Promoters/Homer (Motif 280)


Reverse Opposite:

p-value:1.023e-86
log p-value:-1.980e+02
Information Content per bp:1.697
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GCGATGAGMT
GCGATGAGMT

MA0350.1_TOD6/Jaspar

Match Rank:2
Score:0.92
Offset:-5
Orientation:reverse strand
Alignment:-----GCGATGAGMT------
NNANNGCGATGAGCTNNNNNN

MA0351.1_DOT6/Jaspar

Match Rank:3
Score:0.89
Offset:-5
Orientation:reverse strand
Alignment:-----GCGATGAGMT------
ANGANGCGATGAGGTGCNNNN

CHA4(MacIsaac)/Yeast

Match Rank:4
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GCGATGAGMT
TGCGATGAG--

GLN3(MacIsaac)/Yeast

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCGATGAGMT-
-AGATAAGATA

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCGATGAGMT
CGCGCTGAGCN

MA0579.1_CDC5/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCGATGAGMT
CGCGCTGAGCN

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:8
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GCGATGAGMT-
--GATAAGATA

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCGATGAGMT
--GATAAGA-

srp/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCGATGAGMT
GCGATAAGAN