Information for HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer (Motif 265)

Matches to Known Motifs

HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer Match Rank: 1 Score: 1.00 Offset: 0 Orientation: forward strand Alignment: RACAGCTGTTBH RACAGCTGTTBH

MA0545.1_HLH-1/Jaspar Match Rank: 2 Score: 0.94 Offset: 0 Orientation: reverse strand Alignment: RACAGCTGTTBH GNCAGCTGTTN-

E-box/Drosophila-Promoters/Homer Match Rank: 3 Score: 0.93 Offset: -2 Orientation: reverse strand Alignment: --RACAGCTGTTBH NDAACAGCTGTT--

PL0006.1_hlh-2::lin-32/Jaspar Match Rank: 4 Score: 0.93 Offset: -3 Orientation: forward strand Alignment: ---RACAGCTGTTBH- AAGAACAGCTGTTCTC

PB0047.1_Myf6_1/Jaspar Match Rank: 5 Score: 0.93 Offset: -2 Orientation: reverse strand Alignment: --RACAGCTGTTBH-- CNGACACCTGTTCNNN

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer Match Rank: 6 Score: 0.91 Offset: 1 Orientation: forward strand Alignment: RACAGCTGTTBH -ACAGCTGTTN-

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer Match Rank: 7 Score: 0.91 Offset: 1 Orientation: reverse strand Alignment: RACAGCTGTTBH -ACAGCTGTTV-

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer Match Rank: 8 Score: 0.90 Offset: 0 Orientation: reverse strand Alignment: RACAGCTGTTBH GCCAGCTGBTNB

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer Match Rank: 9 Score: 0.90 Offset: 2 Orientation: reverse strand Alignment: RACAGCTGTTBH --CAGCTGTT--

PL0010.1_hlh-2::hlh-19/Jaspar Match Rank: 10 Score: 0.90 Offset: -3 Orientation: reverse strand Alignment: ---RACAGCTGTTBH- NNTNACAGCTGTTANN