DREF/Drosophila-Promoters/Homer
| Match Rank: | 1 |
| Score: | 1.00 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AVYTATCGATAD AVYTATCGATAD |
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MA0536.1_pnr/Jaspar
| Match Rank: | 2 |
| Score: | 0.98 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AVYTATCGATAD ANCTATCGATA- |
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Dref/dmmpmm(Bergman)/fly
| Match Rank: | 3 |
| Score: | 0.96 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AVYTATCGATAD ---TATCGATA- |
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BEAF-32/dmmpmm(Pollard)/fly
| Match Rank: | 4 |
| Score: | 0.96 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AVYTATCGATAD ---TATCGATA- |
|

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MA0529.1_BEAF-32/Jaspar
| Match Rank: | 5 |
| Score: | 0.95 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----AVYTATCGATAD TCGAAACTATCGATA- |
|

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Dref/dmmpmm(SeSiMCMC)/fly
| Match Rank: | 6 |
| Score: | 0.92 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AVYTATCGATAD --CTATCGATAT |
|

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Dref/dmmpmm(Bigfoot)/fly
| Match Rank: | 7 |
| Score: | 0.92 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AVYTATCGATAD --CTATCGATAT |
|

|
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Dref/dmmpmm(Pollard)/fly
| Match Rank: | 8 |
| Score: | 0.91 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AVYTATCGATAD TNATATCGATAA |
|

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HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer
| Match Rank: | 9 |
| Score: | 0.82 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AVYTATCGATAD --NTATYGATCH |
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srp/dmmpmm(Pollard)/fly
| Match Rank: | 10 |
| Score: | 0.72 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AVYTATCGATAD-- --CTATCGGTAGAT |
|

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