Information for ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer (Motif 245)


Reverse Opposite:

p-value:0.000e+00
log p-value:-4.820e+03
Information Content per bp:1.799
Total Number of Sequences:49993.3
Total Number of Target Sequences:14011.0
Total Instances of Motif:21123.2
Total Instances of Motif in Targets:12598.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AGGCCTNG
AGGCCTNG

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:AGGCCTNG
AGGCCTAG

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTNG-----
CAGGCCNNGGCCNN

MA0381.1_SKN7/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AGGCCTNG
-GGCCAT-

SKN7(MacIsaac)/Yeast

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGGCCTNG-
-GGCCCGGA

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGCCTNG----
CAAAGGCGTGGCCAG

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGGCCTNG--
TGACCTTGAN

MA0403.1_TBF1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGCCTNG
AACCCTAA

PCF/Arabidopsis-Promoters/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGCCTNG----
NHHARGCCCAWWWNN

MA0285.1_CRZ1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTNG
GTGGCTNNG