Information for VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer (Motif 241)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.988e+03
Information Content per bp:1.566
Total Number of Sequences:50001.0
Total Number of Target Sequences:3386.0
Total Instances of Motif:1163.5
Total Instances of Motif in Targets:849.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
NGAGGTCANNGAGTTCANNN

MA0074.1_RXRA::VDR/Jaspar

Match Rank:2
Score:0.92
Offset:2
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
--GGGTCAACGAGTTCA---

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
--AGGTCA------------

MA0258.2_ESR2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
--AGGTCACCCTGACCT---

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----NGAGGTCANNGAGTTCANNN
TCTCAAAGGTCACGAG--------

MA0160.1_NR4A2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
-AAGGTCAC-----------

MA0071.1_RORA_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--NGAGGTCANNGAGTTCANNN
ATCAAGGTCA------------

MA0512.1_Rxra/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-NGAGGTCANNGAGTTCANNN
CAAAGGTCAGA----------

EcR/usp/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
-GAGGTCAATGACCTC----

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----NGAGGTCANNGAGTTCANNN
TCTCAAAGGTCACCTG--------