Information for USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer (Motif 239)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.903e+03
Information Content per bp:1.738
Total Number of Sequences:49999.3
Total Number of Target Sequences:1770.0
Total Instances of Motif:2858.4
Total Instances of Motif in Targets:2055.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGTCACGTGA
GGTCACGTGA

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GGTCACGTGA
-GHCACGTG-

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GGTCACGTGA
-GNCACGTG-

Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GGTCACGTGA
DRTCACGTGA

TYE7(MacIsaac)/Yeast

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GGTCACGTGA
-GTCACGTG-

PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer

Match Rank:6
Score:0.96
Offset:2
Orientation:forward strand
Alignment:GGTCACGTGA--
--BCACGTGVDN

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:7
Score:0.95
Offset:2
Orientation:forward strand
Alignment:GGTCACGTGA
--TCACGTG-

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.95
Offset:1
Orientation:forward strand
Alignment:GGTCACGTGA-
-GTCACGTGGT

MA0409.1_TYE7/Jaspar

Match Rank:9
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:GGTCACGTGA
--TCACGTG-

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GGTCACGTGA
NGKCACGTGM