Information for THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer (Motif 238)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.791e+03
Information Content per bp:1.566
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGTCANYTGAGGWCA
GGTCANYTGAGGWCA

MA0494.1_Nr1h3::Rxra/Jaspar

Match Rank:2
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----GGTCANYTGAGGWCA
NNGAGGTTACTNNAGGTCA

LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGTCANYTGAGGWCA
GGGTTACTANAGGTCA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.72
Offset:9
Orientation:forward strand
Alignment:GGTCANYTGAGGWCA
---------AGGTCA

MA0160.1_NR4A2/Jaspar

Match Rank:5
Score:0.69
Offset:8
Orientation:forward strand
Alignment:GGTCANYTGAGGWCA-
--------AAGGTCAC

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GGTCANYTGAGGWCA-
------TCAAGGTCAN

MA0071.1_RORA_1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GGTCANYTGAGGWCA
-----ATCAAGGTCA

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GGTCANYTGAGGWCA-
------CAAAGGTCAG

MA0592.1_ESRRA/Jaspar

Match Rank:9
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GGTCANYTGAGGWCA--
------CCAAGGTCACA

MA0512.1_Rxra/Jaspar

Match Rank:10
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GGTCANYTGAGGWCA--
------CAAAGGTCAGA