Information for Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer (Motif 232)


Reverse Opposite:

p-value:0.000e+00
log p-value:-8.848e+03
Information Content per bp:1.546
Total Number of Sequences:15000.0
Total Number of Target Sequences:4418.0
Total Instances of Motif:4521.6
Total Instances of Motif in Targets:4367.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NAAACCGGTTNNAACCGGTT
NAAACCGGTTNNAACCGGTT

MA0145.2_Tcfcp2l1/Jaspar

Match Rank:2
Score:0.90
Offset:4
Orientation:forward strand
Alignment:NAAACCGGTTNNAACCGGTT
----CCAGTTCAAACCAG--

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:NAAACCGGTTNNAACCGGTT
NNNGCATGTCNNGACATGCN

MA0525.1_TP63/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:NAAACCGGTTNNAACCGGTT-
-AGACATGCCCAGACATGCCC

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:NAAACCGGTTNNAACCGGTT
NGGGCATGTCTGGGCATGTT

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:NAAACCGGTTNNAACCGGTT
NGGGCATGTCTGGGCATGTT

MA0106.2_TP53/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:NAAACCGGTTNNAACCGGTT
---ACATGCCCAGACATG--

grh/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.55
Offset:11
Orientation:reverse strand
Alignment:NAAACCGGTTNNAACCGGTT
-----------AAACCAG--

grh/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.55
Offset:12
Orientation:forward strand
Alignment:NAAACCGGTTNNAACCGGTT
------------AACCAG--

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:NAAACCGGTTNNAACCGGTT-
-VAAACYKGTHWAACMRGTTT