Information for Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer (Motif 230)


Reverse Opposite:

p-value:0.000e+00
log p-value:-7.836e+03
Information Content per bp:1.732
Total Number of Sequences:73006.0
Total Number of Target Sequences:36503.0
Total Instances of Motif:8897.4
Total Instances of Motif in Targets:7814.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ACATCAAAGGNA
ACATCAAAGGNA

MA0523.1_TCF7L2/Jaspar

Match Rank:2
Score:0.99
Offset:-2
Orientation:forward strand
Alignment:--ACATCAAAGGNA
AAAGATCAAAGGAA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:ACATCAAAGGNA
ACATCAAAGG--

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.97
Offset:-3
Orientation:reverse strand
Alignment:---ACATCAAAGGNA--
NNNAGATCAAAGGANNN

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:ACATCAAAGGNA
ACWTCAAAGG--

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---ACATCAAAGGNA--
NANAGATCAAAGGGNNN

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.96
Offset:-3
Orientation:forward strand
Alignment:---ACATCAAAGGNA--
TATAGATCAAAGGAAAA

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.96
Offset:-3
Orientation:forward strand
Alignment:---ACATCAAAGGNA--
TATAGATCAAAGGAAAA

pan/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-ACATCAAAGGNA
AAGATCAAAGG--

pan/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:ACATCAAAGGNA
--ATCAAAG---