Information for Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer (Motif 228)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.923e+03
Information Content per bp:1.718
Total Number of Sequences:49999.2
Total Number of Target Sequences:3518.0
Total Instances of Motif:4153.7
Total Instances of Motif in Targets:1772.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NCAGCTGCTG
NCAGCTGCTG

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-NCAGCTGCTG-
AGCAGCTGCTNN

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--NCAGCTGCTG
NNACAGCTGC--

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NCAGCTGCTG
ACAGCTGTTN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NCAGCTGCTG
ACAGCTGTTV

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NCAGCTGCTG
-CAGCTGTT-

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--NCAGCTGCTG
NNGCAGCTGTC-

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NCAGCTGCTG
HCAGCTGDTN

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--NCAGCTGCTG
NNGCAGCTGTT-

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-NCAGCTGCTG--
TGCAGCTGTCCCT