Information for Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer (Motif 224)


Reverse Opposite:

p-value:0.000e+00
log p-value:-8.674e+02
Information Content per bp:1.655
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTGAAM

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AGGTGTCA--

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----AGGTGTGAAM---
GAAAAGGTGTGAAAATT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:AGGTGTGAAM
AGGTGTTAAT

MA0009.1_T/Jaspar

Match Rank:5
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--AGGTGTGAAM
CTAGGTGTGAA-

byn/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM--
AAGTGCNANAAC

byn/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AGGTGTGAAM
ANGTGCGA--

byn/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGGTGTGAAM
AAGTGCGA--

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGTGAAM---
TNNNNGGTGTCATNTNT

MA0288.1_CUP9/Jaspar

Match Rank:10
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGTGAAM
AATGTGTCA--