Information for TATA-Box(TBP)/Promoter/Homer (Motif 223)


Reverse Opposite:

p-value:3.158e-174
log p-value:-3.995e+02
Information Content per bp:1.640
Total Number of Sequences:124715.9
Total Number of Target Sequences:9565.0
Total Instances of Motif:11407.0
Total Instances of Motif in Targets:1769.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CCTTTTATAGNC
CCTTTTATAGNC

TATA-box/Drosophila-Promoters/Homer

Match Rank:2
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTATAGNC
BSGCTTTTATAG--

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTTATAGNC
NNNNNNCTTTTATAN--

MA0108.2_TBP/Jaspar

Match Rank:4
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTTTATAGNC
NNNNNNCTTTTATAN--

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CCTTTTATAGNC
--TTTAATTGCN

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCTTTTATAGNC
--TTTTATTRGN

TATA-box/SacCer-Promoters/Homer

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCTTTTATAGNC
BBHWTATATA---

TBP(- other)/several species/AthaMap

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTATAGNC
GGTATTTATAGN-

croc/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCTTTTATAGNC
--TTTTAT----

MA0083.2_SRF/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTATAGNC---
TTNCCTTATTTGGNCATN