Information for STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer (Motif 219)


Reverse Opposite:

p-value:0.000e+00
log p-value:-4.825e+03
Information Content per bp:1.717
Total Number of Sequences:50001.0
Total Number of Target Sequences:5612.0
Total Instances of Motif:6344.2
Total Instances of Motif in Targets:4029.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NTTTCTNAGAAA
NTTTCTNAGAAA

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:forward strand
Alignment:NTTTCTNAGAAA
ATTTCCAAGAA-

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:3
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-NTTTCTNAGAAA-
NATTTCCNGGAAAT

MA0532.1_STAT92E/Jaspar

Match Rank:4
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---NTTTCTNAGAAA
CGGAATTCCAGGAAA

MA0518.1_Stat4/Jaspar

Match Rank:5
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--NTTTCTNAGAAA
NNNTTTCCTGGAAA

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.89
Offset:0
Orientation:forward strand
Alignment:NTTTCTNAGAAA
NTTTCCNGGAAA

MA0137.3_STAT1/Jaspar

Match Rank:7
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:NTTTCTNAGAAA
-TTTCCTGGAAA

MA0144.2_STAT3/Jaspar

Match Rank:8
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:NTTTCTNAGAAA
-TTTCCCAGAAN

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-NTTTCTNAGAAA-
NNCTTCCNGGAAGN

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:NTTTCTNAGAAA----
-TTTCCTGGAAAGNNN