Information for STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer (Motif 218)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.021e+03
Information Content per bp:1.710
Total Number of Sequences:50000.4
Total Number of Target Sequences:5315.0
Total Instances of Motif:4095.3
Total Instances of Motif in Targets:2405.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NTTTCCNGGAAA
NTTTCCNGGAAA

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:NTTTCCNGGAAA--
NCTTCCNGGAAGNN

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:3
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-NTTTCCNGGAAA-
NATTTCCNGGAAAT

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NTTTCCNGGAAA
--TTCCNGGAAG

MA0137.3_STAT1/Jaspar

Match Rank:5
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NTTTCCNGGAAA
-TTTCCAGGAAA

MA0518.1_Stat4/Jaspar

Match Rank:6
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--NTTTCCNGGAAA
NNNTTTCCTGGAAA

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NTTTCCNGGAAA----
-TTTCCTGGAAAGNNN

MA0144.2_STAT3/Jaspar

Match Rank:8
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NTTTCCNGGAAA
-CTTCTGGGAAA

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:9
Score:0.91
Offset:0
Orientation:forward strand
Alignment:NTTTCCNGGAAA
ATTTCCAAGAA-

Stat92E/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----NTTTCCNGGAAA-----
NNNNATTTCCGGGAAANNTNN