Information for Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer (Motif 216)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.838e+03
Information Content per bp:1.602
Total Number of Sequences:50000.4
Total Number of Target Sequences:4858.0
Total Instances of Motif:2431.0
Total Instances of Motif in Targets:1358.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NNCTTCCNGGAAGN
NNCTTCCNGGAAGN

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.98
Offset:2
Orientation:reverse strand
Alignment:NNCTTCCNGGAAGN
--TTTCCNGGAAAN

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:NNCTTCCNGGAAGN
---TTCCNGGAAG-

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NNCTTCCNGGAAGN
NATTTCCNGGAAAT

MA0518.1_Stat4/Jaspar

Match Rank:5
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-NNCTTCCNGGAAGN
NNNTTTCCTGGAAA-

MA0137.3_STAT1/Jaspar

Match Rank:6
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:NNCTTCCNGGAAGN
--TTTCCTGGAAA-

MA0144.2_STAT3/Jaspar

Match Rank:7
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:NNCTTCCNGGAAGN
--TTTCCCAGAAN-

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--NNCTTCCNGGAAGN
NNNCTTTCCAGGAAA-

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:9
Score:0.89
Offset:1
Orientation:forward strand
Alignment:NNCTTCCNGGAAGN
-ATTTCCAAGAA--

MA0532.1_STAT92E/Jaspar

Match Rank:10
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--NNCTTCCNGGAAGN
CGGAATTCCAGGAAA-