Information for STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer (Motif 215)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.582e+03
Information Content per bp:1.635
Total Number of Sequences:16324.0
Total Number of Target Sequences:4675.0
Total Instances of Motif:6674.8
Total Instances of Motif in Targets:5871.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NATTTCCNGGAAAT
NATTTCCNGGAAAT

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.98
Offset:1
Orientation:forward strand
Alignment:NATTTCCNGGAAAT
-NTTTCCNGGAAA-

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NATTTCCNGGAAAT
NNCTTCCNGGAAGN

MA0137.3_STAT1/Jaspar

Match Rank:4
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NATTTCCNGGAAAT
--TTTCCTGGAAA-

MA0518.1_Stat4/Jaspar

Match Rank:5
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-NATTTCCNGGAAAT
NNNTTTCCTGGAAA-

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:NATTTCCNGGAAAT
---TTCCNGGAAG-

MA0532.1_STAT92E/Jaspar

Match Rank:7
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--NATTTCCNGGAAAT
CGGAATTCCAGGAAA-

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--NATTTCCNGGAAAT
NNNCTTTCCAGGAAA-

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:9
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:NATTTCCNGGAAAT
---TTCTTGGAAAN

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NATTTCCNGGAAAT
-NTTTCTNAGAAA-