Information for Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer (Motif 212)


Reverse Opposite:

p-value:5.048e-46
log p-value:-1.043e+02
Information Content per bp:1.737
Total Number of Sequences:49999.0
Total Number of Target Sequences:1004.0
Total Instances of Motif:622.4
Total Instances of Motif in Targets:88.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CNGTCACGCCAC
CNGTCACGCCAC

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.95
Offset:2
Orientation:forward strand
Alignment:CNGTCACGCCAC
--ATCACCCCAT

MA0595.1_SREBF1/Jaspar

Match Rank:3
Score:0.93
Offset:2
Orientation:forward strand
Alignment:CNGTCACGCCAC
--ATCACCCCAC

MA0596.1_SREBF2/Jaspar

Match Rank:4
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:CNGTCACGCCAC
--ATCACCCCAT

MA0450.1_hkb/Jaspar

Match Rank:5
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CNGTCACGCCAC
---TCACGCCCC

hkb/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CNGTCACGCCAC-
-CNTCACGCCCCC

MA0268.1_ADR1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CNGTCACGCCAC
-----ACCCCAC

MA0067.1_Pax2/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CNGTCACGCCAC
-AGTCACGC---

MA0333.1_MET31/Jaspar

Match Rank:9
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CNGTCACGCCAC---
------CGCCACANN

MA0373.1_RPN4/Jaspar

Match Rank:10
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CNGTCACGCCAC-
------CGCCACC