Information for Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer (Motif 21)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.800e+03
Information Content per bp:1.496
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.63
Offset:11
Orientation:reverse strand
Alignment:ANTTMRCASBNNNGTGYKAAN
-----------AGGTGTTAAT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.61
Offset:11
Orientation:forward strand
Alignment:ANTTMRCASBNNNGTGYKAAN
-----------AGGTGTGAAM

CG11617/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ANTTMRCASBNNNGTGYKAAN
ATTTAACATA-----------

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:11
Orientation:forward strand
Alignment:ANTTMRCASBNNNGTGYKAAN
-----------AGGTGTCA--

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ANTTMRCASBNNNGTGYKAAN
NNTTTTCACACCTTNNN------

byn/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.56
Offset:11
Orientation:reverse strand
Alignment:ANTTMRCASBNNNGTGYKAAN
-----------ANGTGCGA--

byn/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ANTTMRCASBNNNGTGYKAAN
AATTCGCAC------------

MA0009.1_T/Jaspar

Match Rank:8
Score:0.55
Offset:9
Orientation:forward strand
Alignment:ANTTMRCASBNNNGTGYKAAN
---------CTAGGTGTGAA-

byn/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ANTTMRCASBNNNGTGYKAAN
AAANTNACACCT----------

byn/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.54
Offset:11
Orientation:forward strand
Alignment:ANTTMRCASBNNNGTGYKAAN
-----------AAGTGCGA--