Information for Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer (Motif 208)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.012e+03
Information Content per bp:1.576
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CCATTGTTNY
CCATTGTTNY

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:forward strand
Alignment:CCATTGTTNY
CCWTTGTY--

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.94
Offset:2
Orientation:forward strand
Alignment:CCATTGTTNY
--ATTGTT--

MA0515.1_Sox6/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CCATTGTTNY
CCATTGTTTT

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CCATTGTTNY
NCCATTGTTC-

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---CCATTGTTNY----
CNNNTATTGTTCNNNNN

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.92
Offset:-4
Orientation:reverse strand
Alignment:----CCATTGTTNY--
ANNTCCATTGTTCNNN

MA0077.1_SOX9/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CCATTGTTNY
CCATTGTTC-

MA0143.3_Sox2/Jaspar

Match Rank:9
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CCATTGTTNY
CCTTTGTT--

MA0445.1_D/Jaspar

Match Rank:10
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CCATTGTTNY
TCCATTGTTCT