Information for Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer (Motif 205)


Reverse Opposite:

p-value:1.146e-246
log p-value:-5.663e+02
Information Content per bp:1.675
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:VBSYGTCTGG
VBSYGTCTGG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.98
Offset:2
Orientation:forward strand
Alignment:VBSYGTCTGG
--CTGTCTGG

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--VBSYGTCTGG-----
NNTNNTGTCTGGNNTNG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.88
Offset:2
Orientation:forward strand
Alignment:VBSYGTCTGG
--TWGTCTGV

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:5
Score:0.82
Offset:3
Orientation:forward strand
Alignment:VBSYGTCTGG---
---GGTCTGGCAT

MA0271.1_ARG80/Jaspar

Match Rank:6
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:VBSYGTCTGG
--GCGTCT--

ARG80(MacIsaac)/Yeast

Match Rank:7
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:VBSYGTCTGG
--GCGTCT--

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:VBSYGTCTGG-----
---TGTCTGDCACCT

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:VBSYGTCTGG-----
--CTGTCTGTCACCT

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-VBSYGTCTGG----
GGNGCGNCTGTTNNN