Information for SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer (Motif 201)


Reverse Opposite:

p-value:7.574e-203
log p-value:-4.654e+02
Information Content per bp:1.586
Total Number of Sequences:50000.9
Total Number of Target Sequences:1774.0
Total Instances of Motif:11903.4
Total Instances of Motif in Targets:1309.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ANCAGCTG
ANCAGCTG

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-ANCAGCTG-
CAGCAGCTGN

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-ANCAGCTG-
NAHCAGCTGD

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--ANCAGCTG--
NNAGCAGCTGCT

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.91
Offset:0
Orientation:forward strand
Alignment:ANCAGCTG
AACAGCTG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:ANCAGCTG---
-GCAGCTGTNN

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-ANCAGCTG-
NAACAGCTGT

MA0500.1_Myog/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:ANCAGCTG---
GACAGCTGCAG

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.91
Offset:0
Orientation:forward strand
Alignment:ANCAGCTG---
AACAGCTGCAG

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-ANCAGCTG-
BAACAGCTGT