Information for BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer (Motif 20)


Reverse Opposite:

p-value:0.000e+00
log p-value:-2.841e+04
Information Content per bp:1.592
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CNNBRGCGCCCCCTGSTGGC
CNNBRGCGCCCCCTGSTGGC

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC--
---TAGCGCCCCCTGGTGGCCA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.94
Offset:2
Orientation:forward strand
Alignment:CNNBRGCGCCCCCTGSTGGC--
--ANAGTGCCACCTGGTGGCCA

MA0531.1_CTCF/Jaspar

Match Rank:4
Score:0.80
Offset:4
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
----GGCGCCATCTAGCGG-

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CNNBRGCGCCCCCTGSTGGC
-GGTCCCGCCCCCTTCTC--

MA0443.1_btd/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
----TCCGCCCCCT------

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
--------CCCCCTGCTGTG

MA0373.1_RPN4/Jaspar

Match Rank:8
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
------CGCCACC-------

MSN4/Literature(Harbison)/Yeast

Match Rank:9
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
--------NCCCCTG-----

MA0342.1_MSN4/Jaspar

Match Rank:10
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:CNNBRGCGCCCCCTGSTGGC
---------CCCCT------