Information for AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer (Motif 2)


Reverse Opposite:

p-value:0.000e+00
log p-value:-2.463e+04
Information Content per bp:1.657
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:SCCTSAGGSCAW
SCCTSAGGSCAW

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:SCCTSAGGSCAW
GCCTCAGGGCAT

MA0003.2_TFAP2A/Jaspar

Match Rank:3
Score:0.95
Offset:-4
Orientation:forward strand
Alignment:----SCCTSAGGSCAW
CATTGCCTCAGGGCA-

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.94
Offset:-3
Orientation:forward strand
Alignment:---SCCTSAGGSCAW
ATTGCCTGAGGCAAT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---SCCTSAGGSCAW
ATTGCCTGAGGCGAA

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----SCCTSAGGSCAW
CATGGCCCCAGGGCA-

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---SCCTSAGGSCAW
ATTCCCTGAGGGGAA

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--SCCTSAGGSCAW
TTGCCCTAGGGCAT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---SCCTSAGGSCAW
ANTGCCTGAGGCAAN

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--SCCTSAGGSCAW
TCACCTCTGGGCAG