Information for RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer (Motif 199)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.018e+03
Information Content per bp:1.743
Total Number of Sequences:91747.1
Total Number of Target Sequences:10405.0
Total Instances of Motif:7588.6
Total Instances of Motif in Targets:2259.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GCTGTGGTTT
GCTGTGGTTT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:GCTGTGGTTT-
-CTGTGGTTTN

MA0002.2_RUNX1/Jaspar

Match Rank:3
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGGTTT
GTCTGTGGTTT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GCTGTGGTTT
NNTGTGGTTT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTGGTTT-
NNHTGTGGTTWN

MA0511.1_RUNX2/Jaspar

Match Rank:6
Score:0.93
Offset:-4
Orientation:forward strand
Alignment:----GCTGTGGTTT-
GGGGTTTGTGGTTTG

MA0332.1_MET28/Jaspar

Match Rank:7
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GCTGTGGTTT
-CTGTGG---

MET28(MacIsaac)/Yeast

Match Rank:8
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GCTGTGGTTT
-CTGTGG---

MA0242.1_run::Bgb/Jaspar

Match Rank:9
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GCTGTGGTTT
-TTGCGGTTA

MA0335.1_MET4/Jaspar

Match Rank:10
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGGTTT
AACTGTGG---