Information for RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer (Motif 198)


Reverse Opposite:

p-value:0.000e+00
log p-value:-9.489e+02
Information Content per bp:1.635
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NWAACCACADNN
NWAACCACADNN

MA0002.2_RUNX1/Jaspar

Match Rank:2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:NWAACCACADNN
-AAACCACAGAN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NWAACCACADNN
NAAACCACAG--

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NWAACCACADNN
-AAACCACAGC-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NWAACCACADNN
-AAACCACANN-

MA0511.1_RUNX2/Jaspar

Match Rank:6
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NWAACCACADNN---
CAAACCACAAACCCC

MA0332.1_MET28/Jaspar

Match Rank:7
Score:0.87
Offset:4
Orientation:reverse strand
Alignment:NWAACCACADNN
----CCACAG--

MET28(MacIsaac)/Yeast

Match Rank:8
Score:0.87
Offset:4
Orientation:reverse strand
Alignment:NWAACCACADNN
----CCACAG--

MET31(MacIsaac)/Yeast

Match Rank:9
Score:0.84
Offset:3
Orientation:reverse strand
Alignment:NWAACCACADNN
---GCCACACC-

MA0334.1_MET32/Jaspar

Match Rank:10
Score:0.84
Offset:2
Orientation:forward strand
Alignment:NWAACCACADNN
--CGCCACA---