Information for Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer (Motif 191)


Reverse Opposite:

p-value:6.153e-200
log p-value:-4.587e+02
Information Content per bp:1.669
Total Number of Sequences:49999.9
Total Number of Target Sequences:2934.0
Total Instances of Motif:795.2
Total Instances of Motif in Targets:323.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
GTAGGTCACTGGGTCA

MA0258.2_ESR2/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA-
--AGGTCACCCTGACCT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
--AGGTCA--------

ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
-NAGGTCACNNTGACC

RTG3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
---GGTCAC-------

MA0066.1_PPARG/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA----
GTAGGTCACGGTGACCTACT

VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA----
NGAGGTCANNGAGTTCANNN

Hr46/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
--GGGTCA--------

MA0071.1_RORA_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTAGGTCACTGGGTCA
ATCAAGGTCA--------

MA0112.2_ESR1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTAGGTCACTGGGTCA------
--AGGTCAGGGTGACCTGGNNN