Information for REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer (Motif 190)


Reverse Opposite:

p-value:0.000e+00
log p-value:-6.592e+03
Information Content per bp:1.743
Total Number of Sequences:14999.0
Total Number of Target Sequences:4244.0
Total Instances of Motif:1558.5
Total Instances of Motif in Targets:1549.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGAGCTGTCCATGGTGCTGA
GGAGCTGTCCATGGTGCTGA

MA0138.2_REST/Jaspar

Match Rank:2
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:GGAGCTGTCCATGGTGCTGA-
GGCGCTGTCCATGGTGCTGAA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGAGCTGTCCATGGTGCTGA
----CTGTTCCTGG------

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.51
Offset:14
Orientation:forward strand
Alignment:GGAGCTGTCCATGGTGCTGA----
--------------TGCTGACTCA

MA0445.1_D/Jaspar

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GGAGCTGTCCATGGTGCTGA
-------TCCATTGTTCT--

SWI5/Literature(Harbison)/Yeast

Match Rank:6
Score:0.51
Offset:14
Orientation:forward strand
Alignment:GGAGCTGTCCATGGTGCTGA
--------------GGCTGA

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GGAGCTGTCCATGGTGCTGA
----CTGACCTTTG------

ttk/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.50
Offset:12
Orientation:forward strand
Alignment:GGAGCTGTCCATGGTGCTGA
------------GGTCCTG-

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:GGAGCTGTCCATGGTGCTGA-----
----------AAANTGCTGACTNAG

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCTGTCCATGGTGCTGA
NNNCAGCTGTCAATATN-----