Information for RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer (Motif 187)


Reverse Opposite:

p-value:5.127e-52
log p-value:-1.181e+02
Information Content per bp:1.762
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AGGTCAAGGTCA
AGGTCAAGGTCA

MA0505.1_Nr5a2/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAAGGTCA--
AAGTTCAAGGTCAGC

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.85
Offset:2
Orientation:forward strand
Alignment:AGGTCAAGGTCA
--BTCAAGGTCA

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.85
Offset:2
Orientation:forward strand
Alignment:AGGTCAAGGTCA
--NTCAAGGTCA

MA0141.2_Esrrb/Jaspar

Match Rank:5
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AGGTCAAGGTCA
AGCTCAAGGTCA

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:AGGTCAAGGTCA-
---TCAAGGTCAN

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGGTCAAGGTCA-----
TATTCAAGGTCATGCGA

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:forward strand
Alignment:AGGTCAAGGTCA--
---CCAAGGTCACA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGTCAAGGTCA
AGGTCA------

MA0071.1_RORA_1/Jaspar

Match Rank:10
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGGTCAAGGTCA
--ATCAAGGTCA