Information for PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer (Motif 182)


Reverse Opposite:

p-value:0.000e+00
log p-value:-7.643e+03
Information Content per bp:1.602
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ADGGYAGYAGCATCT
ADGGYAGYAGCATCT

SeqBias: GCW-triplet

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:ADGGYAGYAGCATCT
---GCAGCAGCAGCA

odd/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ADGGYAGYAGCATCT
--AACAGTAGCA---

Adf1/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ADGGYAGYAGCATCT
--NACAGAAGCAGC-

EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ADGGYAGYAGCATCT-------
--GGYAGCAYDTGCTDCCCNNN

SFL1(MacIsaac)/Yeast

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ADGGYAGYAGCATCT
------GAAGCTTC-

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ADGGYAGYAGCATCT
ATTTACAGTAGCAAAA

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ADGGYAGYAGCATCT
---NNAGCAGCTGCT

MA0454.1_odd/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ADGGYAGYAGCATCT
--AACAGTAGCAG--

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ADGGYAGYAGCATCT----
--CTCAGCAGCTGCTACTG